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1.
Viruses ; 12(12)2020 12 06.
Article in English | MEDLINE | ID: covidwho-967147

ABSTRACT

The International Virus Bioinformatics Meeting 2020 was originally planned to take place in Bern, Switzerland, in March 2020. However, the COVID-19 pandemic put a spoke in the wheel of almost all conferences to be held in 2020. After moving the conference to 8-9 October 2020, we got hit by the second wave and finally decided at short notice to go fully online. On the other hand, the pandemic has made us even more aware of the importance of accelerating research in viral bioinformatics. Advances in bioinformatics have led to improved approaches to investigate viral infections and outbreaks. The International Virus Bioinformatics Meeting 2020 has attracted approximately 120 experts in virology and bioinformatics from all over the world to join the two-day virtual meeting. Despite concerns being raised that virtual meetings lack possibilities for face-to-face discussion, the participants from this small community created a highly interactive scientific environment, engaging in lively and inspiring discussions and suggesting new research directions and questions. The meeting featured five invited and twelve contributed talks, on the four main topics: (1) proteome and RNAome of RNA viruses, (2) viral metagenomics and ecology, (3) virus evolution and classification and (4) viral infections and immunology. Further, the meeting featured 20 oral poster presentations, all of which focused on specific areas of virus bioinformatics. This report summarizes the main research findings and highlights presented at the meeting.


Subject(s)
Computational Biology , RNA Viruses/genetics , Virology , COVID-19 , Congresses as Topic , Evolution, Molecular , Genome, Viral , Humans , Metagenomics , RNA Viruses/pathogenicity
2.
PLoS Pathog ; 16(10): e1008902, 2020 10.
Article in English | MEDLINE | ID: covidwho-842186

ABSTRACT

The first cluster of patients suffering from coronavirus disease 2019 (COVID-19) was identified on December 21, 2019, and as of July 29, 2020, severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) infections have been linked with 664,333 deaths and number at least 16,932,996 worldwide. Unprecedented in global societal impact, the COVID-19 pandemic has tested local, national, and international preparedness for viral outbreaks to the limits. Just as it will be vital to identify missed opportunities and improve contingency planning for future outbreaks, we must also highlight key successes and build on them. Concomitant to the emergence of a novel viral disease, there is a 'research and development gap' that poses a threat to the overall pace and quality of outbreak response during its most crucial early phase. Here, we outline key components of an adequate research response to novel viral outbreaks using the example of SARS-CoV-2. We highlight the exceptional recent progress made in fundamental science, resulting in the fastest scientific response to a major infectious disease outbreak or pandemic. We underline the vital role of the international research community, from the implementation of diagnostics and contact tracing procedures to the collective search for vaccines and antiviral therapies, sustained by unique information sharing efforts.


Subject(s)
Biomedical Research/trends , Coronavirus Infections/virology , International Cooperation , Pneumonia, Viral/virology , Betacoronavirus/genetics , Betacoronavirus/physiology , Biomedical Research/organization & administration , COVID-19 , Contact Tracing , Coronavirus Infections/epidemiology , Coronavirus Infections/mortality , Coronavirus Infections/therapy , Humans , Pandemics , Pneumonia, Viral/epidemiology , Pneumonia, Viral/mortality , Pneumonia, Viral/therapy , SARS-CoV-2
3.
Nat Med ; 26(11): 1691-1693, 2020 11.
Article in English | MEDLINE | ID: covidwho-766131

ABSTRACT

A key unsolved question in the current coronavirus disease 2019 (COVID-19) pandemic is the duration of acquired immunity. Insights from infections with the four seasonal human coronaviruses might reveal common characteristics applicable to all human coronaviruses. We monitored healthy individuals for more than 35 years and determined that reinfection with the same seasonal coronavirus occurred frequently at 12 months after infection.


Subject(s)
Adaptive Immunity/physiology , COVID-19 , Coronavirus Infections/immunology , Coronavirus/immunology , Reinfection/immunology , Seasons , Adolescent , Adult , Aged , Aged, 80 and over , COVID-19/blood , COVID-19/epidemiology , COVID-19/immunology , COVID-19/prevention & control , Cohort Studies , Coinfection/blood , Coinfection/epidemiology , Coronavirus/genetics , Coronavirus Infections/blood , Coronavirus Infections/epidemiology , Coronavirus Infections/virology , Follow-Up Studies , HIV Infections/complications , HIV Infections/epidemiology , Humans , Male , Middle Aged , Netherlands/epidemiology , Pandemics , RNA, Viral/analysis , RNA, Viral/blood , Reinfection/blood , Reinfection/epidemiology , Reinfection/virology , SARS-CoV-2/genetics , SARS-CoV-2/immunology , Serologic Tests/methods , Time Factors , Young Adult
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